http://tech.groups.yahoo.com/group/cnsbb/ CNS software package bulletin board Wed, 10 Feb 2010 07:18:14 GMT Ed Pozharski http://tech.groups.yahoo.com/group/cnsbb/message/1889 http://tech.groups.yahoo.com/group/cnsbb/message/1889 Did you try the Windows executables from CNS website? If that doesn't work, consider running linux version in a virtual machine. Or break with the dark side Tue, 09 Feb 2010 06:03:24 GMT Satyabrata Das http://tech.groups.yahoo.com/group/cnsbb/message/1888 http://tech.groups.yahoo.com/group/cnsbb/message/1888 Dear All, I want to install CNS in a PC running on Windows-Vista (32bit). Is it possible? if yes, How to do it? Ideal thing if executable file is available. Mon, 08 Feb 2010 06:11:09 GMT amitd_01 http://tech.groups.yahoo.com/group/cnsbb/message/1887 http://tech.groups.yahoo.com/group/cnsbb/message/1887 Yes I am using 1.21 version. Forcing the wa to higher than automatic value of wa= 7.230911E-02, increases the r and rfree to above 50! ... rweight= 0.0100 r= Fri, 05 Feb 2010 22:40:15 GMT Ed Pozharski http://tech.groups.yahoo.com/group/cnsbb/message/1886 http://tech.groups.yahoo.com/group/cnsbb/message/1886 Just to verify, you are using the *latest* version, 1.21 (not 1.2)? This is really strange. Do both R and Rfree go up when you weaken restraints? And how Fri, 05 Feb 2010 10:54:21 GMT amitd_01 http://tech.groups.yahoo.com/group/cnsbb/message/1885 http://tech.groups.yahoo.com/group/cnsbb/message/1885 Hello everybody, When using refine.inp of CNS ver 1.2 the rsmd bonds and angles outputs are 0.000 and very low values of wa=2x10-2 and rweight= 0.02 resptly. Wed, 27 Jan 2010 18:45:59 GMT Ed Pozharski http://tech.groups.yahoo.com/group/cnsbb/message/1884 http://tech.groups.yahoo.com/group/cnsbb/message/1884 Simple, yet interesting. It may be described somewhere in the XPLOR manual, but a quick look at the .inp files reveals no examples of what you are trying to Wed, 27 Jan 2010 16:02:37 GMT stan_124 http://tech.groups.yahoo.com/group/cnsbb/message/1883 http://tech.groups.yahoo.com/group/cnsbb/message/1883 Hey, How do I type the logic AND operator? I tried '&&' and '&' and 'and' and nothing works. Can you help me understand how to put 'and' 'or' and 'not' in Wed, 27 Jan 2010 02:43:12 GMT Christian Biertuempfel http://tech.groups.yahoo.com/group/cnsbb/message/1882 http://tech.groups.yahoo.com/group/cnsbb/message/1882 Dear all, I am refining a crystal structure with a modified DNA base. I tried to input the modification via a patch in cns (1.2). So, I modified generate.inp, Tue, 26 Jan 2010 01:47:59 GMT Robert Sweet http://tech.groups.yahoo.com/group/cnsbb/message/1881 http://tech.groups.yahoo.com/group/cnsbb/message/1881 We are offering RapiData 2010, the twelfth offering of our popular course: Rapid Data Collection and Structure Solving at the NSLS: A Practical Course in Thu, 21 Jan 2010 23:32:54 GMT Axel Brunger http://tech.groups.yahoo.com/group/cnsbb/message/1880 http://tech.groups.yahoo.com/group/cnsbb/message/1880 ... Axel T. Brunger Investigator, Howard Hughes Medical Institute Professor of Molecular and Cellular Physiology Stanford University Web: Tue, 05 Jan 2010 14:43:51 GMT Ed Pozharski http://tech.groups.yahoo.com/group/cnsbb/message/1879 http://tech.groups.yahoo.com/group/cnsbb/message/1879 http://cns.csb.yale.edu/v1.2/tutorial/language/atom_sele_basic/text.html http://cns.csb.yale.edu/v1.2/tutorial/language/atom_sele/text.html These parts of Tue, 05 Jan 2010 09:24:48 GMT Venkataraman http://tech.groups.yahoo.com/group/cnsbb/message/1878 http://tech.groups.yahoo.com/group/cnsbb/message/1878 Hi I wanted to do ncs restrain for only main chain. I do have six monomer and wanted to do the ncs restrain for main chain. I mutated many residues to alanine Mon, 04 Jan 2010 13:18:51 GMT Robert Sweet http://tech.groups.yahoo.com/group/cnsbb/message/1877 http://tech.groups.yahoo.com/group/cnsbb/message/1877 We are offering RapiData 2010, the twelfth offering of our popular course: Rapid Data Collection and Structure Solving at the NSLS: A Practical Course in Wed, 30 Dec 2009 17:31:26 GMT Ed Pozharski http://tech.groups.yahoo.com/group/cnsbb/message/1876 http://tech.groups.yahoo.com/group/cnsbb/message/1876 {===>} atom_fixed=(name c or name n or name ca or name o or name ot+); to fix the backbone. To get energy values: energy end See here for more details and/or Tue, 29 Dec 2009 22:44:16 GMT Venkataraman http://tech.groups.yahoo.com/group/cnsbb/message/1875 http://tech.groups.yahoo.com/group/cnsbb/message/1875 hi all I am trying to minimize the model with chain ID as A and residues are 100-200 , 300-400, 500-600. I did generate pdb and mtf seems fine and takes the